Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter permease oppb | EXZ48_00760 | Not Available | + | 159893 - 160816 | 33255.8 |
| abc transporter permease subunit | EXZ48_00765 | Not Available | + | 160809 - 161939 | 41373.8 |
| abc transporter atp-binding protein | EXZ48_00770 | Not Available | + | 161962 - 163557 | 58402.9 |
| yvck family protein | EXZ48_00775 | Not Available | + | 163644 - 164771 | 40151.2 |
| eal domain-containing protein | EXZ48_00780 | Not Available | - | 164749 - 167424 | 98814.4 |
| phenylacetic acid degradation operon negative regulatory protein paax | EXZ48_00785 | Not Available | + | 167654 - 168541 | 31750.3 |
| 3-oxoadipyl-coa thiolase | EXZ48_00790 | Not Available | + | 168710 - 169915 | 41563.9 |
| 1,2-phenylacetyl-coa epoxidase subunit a | EXZ48_00795 | Not Available | + | 169939 - 170943 | 37808.8 |
| 1,2-phenylacetyl-coa epoxidase subunit b | EXZ48_00800 | Not Available | + | 170957 - 171241 | 10614.4 |
| phenylacetate-coa oxygenase subunit paai | EXZ48_00805 | Not Available | + | 171241 - 171996 | 27946.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.