Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | EXZ48_00365 | Not Available | + | 80408 - 81949 | 54870.3 |
| abc transporter permease | EXZ48_00370 | Not Available | + | 82048 - 83088 | 35714.9 |
| d-ribose abc transporter substrate-binding protein | EXZ48_00375 | Not Available | + | 83206 - 84153 | 32986.1 |
| deor/glpr transcriptional regulator | EXZ48_00380 | Not Available | + | 84259 - 85098 | 31219.7 |
| dihydroxyacetone kinase family protein | EXZ48_00385 | Not Available | + | 85165 - 86865 | 58125.4 |
| semialdehyde dehydrogenase | EXZ48_00390 | Not Available | + | 87190 - 88017 | 29512.8 |
| d-ribose abc transporter substrate-binding protein | EXZ48_00395 | Not Available | + | 88122 - 89063 | 32994.3 |
| duf2291 family protein | EXZ48_00400 | Not Available | + | 89133 - 89771 | 22752.2 |
| sugar abc transporter atp-binding protein | EXZ48_00405 | Not Available | + | 89773 - 91317 | 56192.3 |
| abc transporter permease | EXZ48_00410 | Not Available | + | 91317 - 92384 | 37041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.