Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | EXZ48_00115 | Not Available | + | 27467 - 28534 | 37832.0 |
| gfo/idh/moca family oxidoreductase | EXZ48_00120 | Not Available | + | 28525 - 29550 | 36967.0 |
| glucokinase | EXZ48_00125 | Not Available | + | 29498 - 30526 | 36783.0 |
| abc transporter substrate-binding protein | EXZ48_00130 | Not Available | + | 30750 - 32399 | 60217.1 |
| abc transporter permease | EXZ48_00135 | Not Available | + | 32439 - 33485 | 38074.2 |
| abc transporter permease | EXZ48_00140 | Not Available | + | 33482 - 34399 | 32888.1 |
| abc transporter atp-binding protein | EXZ48_00145 | Not Available | + | 34396 - 35229 | 30503.6 |
| abc transporter atp-binding protein | EXZ48_00150 | Not Available | + | 35226 - 35975 | 26942.4 |
| winged helix-turn-helix transcriptional regulator | EXZ48_00155 | Not Available | - | 35982 - 36455 | 17554.4 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | EXZ48_00160 | Not Available | + | 36626 - 40318 | 131442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.