Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iv | EXZ48_07485 | Not Available | - | 1593417 - 1594763 | 49463.7 |
| duf3572 family protein | EXZ48_07490 | Not Available | - | 1594887 - 1595186 | 10162.0 |
| response regulator | EXZ48_07495 | Not Available | + | 1595328 - 1595699 | 13933.0 |
| pled family two-component system response regulator | EXZ48_07500 | Not Available | + | 1595716 - 1597083 | 50178.6 |
| 50s ribosomal protein l33 | EXZ48_07505 | Not Available | - | 1597766 - 1597933 | 6344.87 |
| mfs transporter | EXZ48_07510 | Not Available | - | 1598027 - 1599211 | 41538.0 |
| hydrolase | EXZ48_07515 | Not Available | - | 1599225 - 1599887 | 24542.7 |
| duf983 domain-containing protein | EXZ48_07520 | Not Available | - | 1599884 - 1600360 | 17237.8 |
| ribonuclease r | EXZ48_07525 | Not Available | - | 1600429 - 1602780 | 85795.7 |
| type i dna topoisomerase | EXZ48_07530 | Not Available | - | 1602785 - 1605433 | 96194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.