Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease j | EXZ48_07435 | Not Available | + | 1579283 - 1580950 | 60796.9 |
| duf1467 family protein | EXZ48_07440 | Not Available | + | 1581105 - 1581374 | 10105.4 |
| proline--trna ligase | EXZ48_07445 | Not Available | + | 1582093 - 1583421 | 49574.4 |
| lipoprotein-releasing abc transporter permease subunit | EXZ48_07450 | Not Available | + | 1583455 - 1584762 | 46606.1 |
| abc transporter atp-binding protein | EXZ48_07455 | Not Available | + | 1584772 - 1585458 | 24593.5 |
| hypothetical protein | EXZ48_07460 | Not Available | - | 1585480 - 1586058 | 20593.2 |
| dna polymerase iii subunit alpha | EXZ48_07465 | Not Available | + | 1586397 - 1589894 | 129292.0 |
| peptidase e | EXZ48_07470 | Not Available | + | 1589891 - 1590613 | 25948.2 |
| duf4375 domain-containing protein | EXZ48_07475 | Not Available | - | 1590691 - 1591851 | 41114.1 |
| hypothetical protein | EXZ48_07480 | Not Available | - | 1591972 - 1593285 | 47004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.