Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urocanate hydratase | EXZ48_07285 | Not Available | - | 1547801 - 1549477 | 60985.6 |
| n-formylglutamate deformylase | EXZ48_07290 | Not Available | - | 1549494 - 1550294 | 29502.0 |
| histidine ammonia-lyase | EXZ48_07295 | Not Available | - | 1550296 - 1551831 | 52875.2 |
| imidazolonepropionase | EXZ48_07300 | Not Available | - | 1551874 - 1553097 | 43465.0 |
| formimidoylglutamate deiminase | EXZ48_07305 | Not Available | + | 1553211 - 1554557 | 47528.4 |
| histidine utilization repressor | EXZ48_07310 | Not Available | + | 1554589 - 1555398 | 30241.9 |
| adenylate/guanylate cyclase domain-containing protein | EXZ48_07315 | Not Available | - | 1555402 - 1557360 | 69015.1 |
| hypothetical protein | EXZ48_07320 | Not Available | + | 1557544 - 1558086 | 20389.8 |
| adenylate/guanylate cyclase domain-containing protein | EXZ48_07325 | Not Available | - | 1558698 - 1560500 | 64419.7 |
| Trna-val | Not Available | Not Available | + | 1560784 - 1560859 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.