Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | EXZ48_07185 | Not Available | - | 1521433 - 1522683 | 47165.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EXZ48_07190 | Not Available | + | 1522782 - 1523027 | 8992.69 |
| type ii toxin-antitoxin system vapc family toxin | EXZ48_07195 | Not Available | + | 1523024 - 1523410 | 13832.9 |
| gamma-glutamyltransferase | EXZ48_07200 | Not Available | - | 1523411 - 1525165 | 61144.3 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EXZ48_07205 | Not Available | + | 1525438 - 1526070 | 23329.2 |
| mmcq/yjbr family dna-binding protein | EXZ48_07210 | Not Available | + | 1526097 - 1526462 | 13229.8 |
| atp-dependent clp protease atp-binding subunit clpx | EXZ48_07215 | Not Available | + | 1526728 - 1528005 | 46911.6 |
| endopeptidase la | EXZ48_07220 | Not Available | + | 1528419 - 1530842 | 89289.1 |
| hu family dna-binding protein | EXZ48_07225 | Not Available | + | 1531048 - 1531323 | 9437.11 |
| esterase-like activity of phytase family protein | EXZ48_07230 | Not Available | + | 1531511 - 1533706 | 77050.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.