Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | EXZ48_07135 | Not Available | - | 1514929 - 1515393 | 17373.1 |
| paai family thioesterase | EXZ48_07140 | Not Available | - | 1515623 - 1516054 | 15437.8 |
| enoyl-coa hydratase | EXZ48_07145 | Not Available | + | 1516192 - 1517007 | 28647.9 |
| txe/yoeb family addiction module toxin | EXZ48_07150 | Not Available | - | 1517012 - 1517281 | 10222.4 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | EXZ48_07155 | Not Available | - | 1517278 - 1517547 | 10081.9 |
| hypothetical protein | EXZ48_07160 | Not Available | - | 1517606 - 1518442 | 29153.4 |
| coa-binding protein | EXZ48_07165 | Not Available | + | 1518684 - 1519121 | 15574.8 |
| coa-binding protein | EXZ48_07170 | Not Available | + | 1519187 - 1519615 | 15389.8 |
| o-acetylhomoserine aminocarboxypropyltransferase | EXZ48_07175 | Not Available | + | 1519731 - 1521014 | 45910.5 |
| cupin domain-containing protein | EXZ48_07180 | Not Available | + | 1521076 - 1521420 | 13023.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.