Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginyltransferase | EXZ48_06935 | Not Available | - | 1477352 - 1478116 | 29275.1 |
| rdd family protein | EXZ48_06940 | Not Available | - | 1478261 - 1478725 | 17054.4 |
| porphobilinogen synthase | EXZ48_06945 | Not Available | - | 1478959 - 1479975 | 36734.2 |
| hypothetical protein | EXZ48_06950 | Not Available | + | 1480130 - 1480567 | 15977.8 |
| marr family transcriptional regulator | EXZ48_06955 | Not Available | + | 1480698 - 1481210 | 19569.5 |
| murein l,d-transpeptidase | EXZ48_06960 | Not Available | + | 1481497 - 1482819 | 48598.6 |
| serine hydroxymethyltransferase | EXZ48_06965 | Not Available | + | 1483011 - 1484309 | 46661.8 |
| transcriptional repressor nrdr | EXZ48_06970 | Not Available | + | 1484376 - 1484855 | 17966.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EXZ48_06975 | Not Available | + | 1484856 - 1485968 | 38162.1 |
| riboflavin synthase | EXZ48_06980 | Not Available | + | 1485968 - 1486585 | 22029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.