Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | EXZ48_06885 | Not Available | - | 1464509 - 1465369 | 32007.7 |
| molybdopterin oxidoreductase family protein | EXZ48_06890 | Not Available | + | 1465463 - 1467595 | 77648.4 |
| nudix domain-containing protein | EXZ48_06895 | Not Available | + | 1467616 - 1468212 | 21684.7 |
| aspartate--trna ligase | EXZ48_06900 | Not Available | + | 1468560 - 1470350 | 67156.1 |
| cell envelope integrity protein cred | EXZ48_06905 | Not Available | + | 1470581 - 1471963 | 49881.8 |
| hypothetical protein | EXZ48_06910 | Not Available | - | 1472038 - 1473234 | 41606.5 |
| dna topoisomerase iv subunit a | EXZ48_06915 | Not Available | + | 1473444 - 1475696 | 83287.2 |
| type ii toxin-antitoxin system death-on-curing family toxin | EXZ48_06920 | Not Available | - | 1475697 - 1476089 | 14397.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | EXZ48_06925 | Not Available | - | 1476086 - 1476307 | 8119.07 |
| dmt family transporter | EXZ48_06930 | Not Available | - | 1476359 - 1477273 | 32122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.