Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EXZ48_06835 | Not Available | + | 1456160 - 1457056 | 31533.0 |
| molybdenum cofactor biosynthesis protein moae | EXZ48_06840 | Not Available | - | 1457063 - 1457527 | 16735.9 |
| molybdopterin converting factor subunit 1 | EXZ48_06845 | Not Available | - | 1457531 - 1457785 | 9356.25 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | EXZ48_06850 | Not Available | - | 1457787 - 1458371 | 21584.8 |
| hypothetical protein | EXZ48_06855 | Not Available | - | 1458527 - 1458994 | 16335.4 |
| excinuclease abc subunit uvrc | EXZ48_06860 | Not Available | - | 1459059 - 1461110 | 75450.8 |
| sdr family oxidoreductase | EXZ48_06865 | Not Available | - | 1461107 - 1461871 | 27074.3 |
| porin family protein | EXZ48_06870 | Not Available | + | 1462229 - 1462870 | 22270.9 |
| glutathione s-transferase | EXZ48_06875 | Not Available | - | 1463097 - 1463687 | 22242.7 |
| ribonuclease | EXZ48_06880 | Not Available | - | 1463703 - 1464431 | 26383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.