Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | EXZ48_06785 | Not Available | - | 1446920 - 1447747 | 29849.3 |
| abc transporter atp-binding protein | EXZ48_06790 | Not Available | - | 1447834 - 1449720 | 68653.1 |
| ggdef domain-containing protein | EXZ48_06795 | Not Available | - | 1449827 - 1450906 | 38020.6 |
| hypothetical protein | EXZ48_06800 | Not Available | - | 1451100 - 1451384 | 10468.7 |
| damage-inducible protein dinb | EXZ48_06805 | Not Available | - | 1451583 - 1452092 | 19174.7 |
| glutathione s-transferase family protein | EXZ48_06810 | Not Available | + | 1452227 - 1452916 | 25258.3 |
| nucleoside-diphosphate kinase | EXZ48_06815 | Not Available | + | 1453022 - 1453444 | 15355.3 |
| hypothetical protein | EXZ48_06820 | Not Available | - | 1453515 - 1454924 | 50230.9 |
| hypothetical protein | EXZ48_06825 | Not Available | - | 1454984 - 1455490 | 18264.2 |
| hypothetical protein | EXZ48_06830 | Not Available | - | 1455487 - 1456041 | 20365.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.