Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | EXZ48_06735 | Not Available | + | 1436775 - 1438265 | 52076.9 |
| dna polymerase iii subunit chi | EXZ48_06740 | Not Available | + | 1438273 - 1438722 | 17093.9 |
| marr family transcriptional regulator | EXZ48_06745 | Not Available | + | 1438776 - 1439177 | 14618.8 |
| mfs transporter | EXZ48_06750 | Not Available | + | 1439267 - 1440562 | 45973.9 |
| gfo/idh/moca family oxidoreductase | EXZ48_06755 | Not Available | - | 1440614 - 1441540 | 33870.5 |
| trap transporter small permease subunit | EXZ48_06760 | Not Available | + | 1441788 - 1442363 | 20952.0 |
| trap transporter large permease subunit | EXZ48_06765 | Not Available | + | 1442360 - 1444153 | 62683.4 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | EXZ48_06770 | Not Available | + | 1444260 - 1444634 | 14427.0 |
| twin-arginine translocation signal domain-containing protein | EXZ48_06775 | Not Available | - | 1444715 - 1445821 | 39943.5 |
| gnat family n-acetyltransferase | EXZ48_06780 | Not Available | + | 1446071 - 1446913 | 30507.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.