Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | EXZ48_06685 | Not Available | + | 1424356 - 1425615 | 43763.1 |
| endolytic transglycosylase mltg | EXZ48_06690 | Not Available | + | 1425734 - 1426915 | 43413.6 |
| yicc family protein | EXZ48_06695 | Not Available | + | 1427153 - 1428040 | 31782.2 |
| guanylate kinase | EXZ48_06700 | Not Available | + | 1428044 - 1428703 | 25106.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EXZ48_06705 | Not Available | - | 1428885 - 1429712 | 30109.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EXZ48_06710 | Not Available | - | 1429712 - 1430746 | 35685.2 |
| peptidylprolyl isomerase | EXZ48_06715 | Not Available | - | 1430830 - 1431768 | 34517.8 |
| lps-assembly protein lptd | EXZ48_06720 | Not Available | - | 1431914 - 1434244 | 86278.2 |
| lps export abc transporter permease lptg | EXZ48_06725 | Not Available | - | 1434244 - 1435326 | 39485.8 |
| lps export abc transporter permease lptf | EXZ48_06730 | Not Available | - | 1435323 - 1436507 | 43421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.