Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | EXZ48_06635 | Not Available | - | 1416814 - 1417392 | 20879.6 |
| duf2232 domain-containing protein | EXZ48_06640 | Not Available | - | 1417414 - 1418409 | 34716.3 |
| 30s ribosomal protein s18 | EXZ48_06645 | Not Available | - | 1418653 - 1418901 | 9310.52 |
| 30s ribosomal protein s6 | EXZ48_06650 | Not Available | - | 1418926 - 1419378 | 17404.6 |
| hypothetical protein | EXZ48_06655 | Not Available | + | 1419727 - 1420092 | 11749.3 |
| voc family protein | EXZ48_06660 | Not Available | + | 1420257 - 1420730 | 17059.1 |
| aldo/keto reductase | EXZ48_06665 | Not Available | - | 1420787 - 1421830 | 38136.3 |
| [acyl-carrier-protein] s-malonyltransferase | EXZ48_06670 | Not Available | + | 1422024 - 1422968 | 32304.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | EXZ48_06675 | Not Available | + | 1422992 - 1423729 | 25965.5 |
| acyl carrier protein | EXZ48_06680 | Not Available | + | 1424013 - 1424249 | 8326.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.