Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| citramalate synthase | EXZ48_06535 | Not Available | + | 1392400 - 1394016 | 57612.4 |
| eama family transporter rard | EXZ48_06540 | Not Available | + | 1394127 - 1395071 | 33995.4 |
| n-acetyltransferase | EXZ48_06545 | Not Available | + | 1395075 - 1395593 | 19221.7 |
| tigr00730 family rossman fold protein | EXZ48_06550 | Not Available | - | 1395621 - 1396241 | 22665.7 |
| lysm peptidoglycan-binding domain-containing protein | EXZ48_06555 | Not Available | + | 1397037 - 1398764 | 57317.3 |
| abc transporter atp-binding protein/permease | EXZ48_06560 | Not Available | + | 1398954 - 1400849 | 70231.1 |
| voc family protein | EXZ48_06565 | Not Available | - | 1400850 - 1401497 | 23736.5 |
| phosphatidylserine decarboxylase | EXZ48_06570 | Not Available | + | 1401773 - 1402471 | 25415.9 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | EXZ48_06575 | Not Available | + | 1402566 - 1403417 | 30798.0 |
| marr family transcriptional regulator | EXZ48_06580 | Not Available | + | 1403551 - 1404006 | 16859.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.