Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EXZ48_06435 | Not Available | + | 1378000 - 1378371 | 13756.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | EXZ48_06440 | Not Available | + | 1378368 - 1379273 | 31905.6 |
| superoxide dismutase family protein | EXZ48_06445 | Not Available | + | 1379344 - 1379859 | 17931.9 |
| mechanosensitive ion channel family protein | EXZ48_06450 | Not Available | - | 1379862 - 1380692 | 30228.6 |
| nad regulator | EXZ48_06455 | Not Available | - | 1380815 - 1381789 | 36041.3 |
| protein tyrosine phosphatase | EXZ48_06460 | Not Available | - | 1381786 - 1382319 | 18583.5 |
| hd family hydrolase | EXZ48_06465 | Not Available | - | 1382322 - 1382951 | 22746.4 |
| folate-binding protein | EXZ48_06470 | Not Available | - | 1382948 - 1383793 | 29449.3 |
| amino acid transporter | EXZ48_06475 | Not Available | + | 1383961 - 1384569 | 22687.1 |
| hypothetical protein | EXZ48_06480 | Not Available | - | 1384573 - 1385355 | 28445.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.