Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf839 domain-containing protein | EXZ48_06385 | Not Available | - | 1365735 - 1366706 | 34246.4 |
| duf2339 domain-containing protein | EXZ48_06390 | Not Available | + | 1366835 - 1369696 | 99090.9 |
| hd domain-containing protein | EXZ48_06395 | Not Available | + | 1369731 - 1370384 | 23231.9 |
| mosc domain-containing protein | EXZ48_06400 | Not Available | + | 1370464 - 1371309 | 31087.1 |
| sulfotransferase | EXZ48_06405 | Not Available | - | 1371312 - 1372073 | 28413.0 |
| magnesium transporter | EXZ48_06410 | Not Available | - | 1372137 - 1373129 | 36904.9 |
| mfs transporter | EXZ48_06415 | Not Available | + | 1373433 - 1374668 | 43565.0 |
| quinolinate synthase nada | EXZ48_06420 | Not Available | + | 1374840 - 1375919 | 39594.9 |
| l-aspartate oxidase | EXZ48_06425 | Not Available | + | 1376087 - 1377685 | 56708.1 |
| type ii toxin-antitoxin system pard family antitoxin | EXZ48_06430 | Not Available | + | 1377746 - 1378003 | 9265.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.