Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diguanylate cyclase/phosphodiesterase | EXZ48_06335 | Not Available | - | 1355075 - 1357438 | 87507.4 |
| spermidine/putrescine abc transporter substrate-binding protein | EXZ48_06340 | Not Available | - | 1357425 - 1358474 | 37957.0 |
| rna-binding transcriptional accessory protein | EXZ48_06345 | Not Available | + | 1358704 - 1361013 | 83425.3 |
| bkc/gpc family carbapenem-hydrolyzing class a beta-lactamase | EXZ48_06350 | Not Available | + | 1361161 - 1362054 | 31296.4 |
| arsr family transcriptional regulator | EXZ48_06355 | Not Available | - | 1362098 - 1362421 | 12117.6 |
| atpase | EXZ48_06360 | Not Available | + | 1362495 - 1362983 | 18080.5 |
| glyoxalase/bleomycin resistance/dioxygenase family protein | EXZ48_06365 | Not Available | + | 1362999 - 1363361 | 13302.8 |
| l,d-transpeptidase | EXZ48_06370 | Not Available | - | 1363407 - 1364006 | 21966.5 |
| dna repair protein reco | EXZ48_06375 | Not Available | + | 1364343 - 1365107 | 28088.7 |
| paai family thioesterase | EXZ48_06380 | Not Available | + | 1365104 - 1365613 | 17946.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.