Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_06235 | Not Available | + | 1332457 - 1335957 | 127217.0 |
| merr family transcriptional regulator | EXZ48_06240 | Not Available | + | 1336094 - 1337029 | 34581.0 |
| calcium-binding protein | EXZ48_06245 | Not Available | - | 1337106 - 1338218 | 39081.6 |
| Trna-ser | Not Available | Not Available | + | 1338529 - 1338618 | Not Available |
| porin | EXZ48_06255 | Not Available | + | 1339400 - 1340455 | 37391.0 |
| alpha/beta hydrolase | EXZ48_06260 | Not Available | - | 1340595 - 1341470 | 31737.9 |
| lytic transglycosylase domain-containing protein | EXZ48_06265 | Not Available | - | 1341847 - 1343916 | 74981.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EXZ48_06270 | Not Available | + | 1344241 - 1345125 | 31050.2 |
| ssra-binding protein smpb | EXZ48_06275 | Not Available | + | 1345127 - 1345606 | 18594.5 |
| hypothetical protein | EXZ48_06280 | Not Available | - | 1345636 - 1346112 | 16112.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.