Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | EXZ48_06185 | Not Available | - | 1320947 - 1321378 | 15999.6 |
| hypothetical protein | EXZ48_06190 | Not Available | - | 1321506 - 1321862 | 13642.5 |
| acyl-coa dehydrogenase | EXZ48_06195 | Not Available | - | 1321981 - 1323204 | 44892.8 |
| phb depolymerase family esterase | EXZ48_06200 | Not Available | + | 1323404 - 1324462 | 39102.8 |
| 5-deoxy-glucuronate isomerase | EXZ48_06205 | Not Available | - | 1324470 - 1325264 | 28960.0 |
| myo-inosose-2 dehydratase | EXZ48_06210 | Not Available | - | 1325300 - 1326217 | 33432.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | EXZ48_06215 | Not Available | - | 1326334 - 1328184 | 65410.7 |
| 5-dehydro-2-deoxygluconokinase | EXZ48_06220 | Not Available | - | 1328265 - 1330199 | 70731.4 |
| murr/rpir family transcriptional regulator | EXZ48_06225 | Not Available | - | 1330321 - 1331178 | 30542.4 |
| gfo/idh/moca family oxidoreductase | EXZ48_06230 | Not Available | + | 1331391 - 1332512 | 40804.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.