Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family lipid kinase | EXZ48_06135 | Not Available | + | 1311086 - 1312024 | 33870.6 |
| glutamine synthetase | EXZ48_06140 | Not Available | - | 1312190 - 1313548 | 49674.1 |
| aspartate aminotransferase family protein | EXZ48_06145 | Not Available | + | 1313698 - 1315071 | 49906.7 |
| pin domain nuclease | EXZ48_06150 | Not Available | - | 1315081 - 1315470 | 14143.6 |
| type ii toxin-antitoxin system vapb family antitoxin | EXZ48_06155 | Not Available | - | 1315467 - 1315697 | 8604.15 |
| amp nucleosidase | EXZ48_06160 | Not Available | - | 1315762 - 1317264 | 55444.1 |
| ynfa family protein | EXZ48_06165 | Not Available | - | 1317390 - 1317710 | 11375.1 |
| duf2147 domain-containing protein | EXZ48_06170 | Not Available | - | 1318554 - 1318892 | 11412.8 |
| sel1 repeat family protein | EXZ48_06175 | Not Available | + | 1319359 - 1319628 | 9751.79 |
| pyridoxal phosphate-dependent aminotransferase | EXZ48_06180 | Not Available | - | 1319704 - 1320825 | 39812.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.