Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | EXZ48_06080 | Not Available | - | 1299023 - 1300438 | 49629.0 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | EXZ48_06085 | Not Available | + | 1300702 - 1302366 | 60470.2 |
| l,d-transpeptidase | EXZ48_06090 | Not Available | + | 1302606 - 1303235 | 22833.5 |
| abc transporter substrate-binding protein | EXZ48_06095 | Not Available | + | 1303610 - 1304608 | 35880.3 |
| proline/glycine betaine abc transporter permease | EXZ48_06100 | Not Available | + | 1304766 - 1305653 | 32807.4 |
| dmt family transporter | EXZ48_06105 | Not Available | - | 1305717 - 1306625 | 30466.2 |
| lrp/asnc family transcriptional regulator | EXZ48_06110 | Not Available | + | 1306766 - 1307236 | 17175.0 |
| doxx family protein | EXZ48_06115 | Not Available | - | 1307345 - 1307761 | 14866.4 |
| transcriptional regulator | EXZ48_06125 | Not Available | + | 1309069 - 1309473 | 15038.3 |
| mfs transporter | EXZ48_06130 | Not Available | - | 1309494 - 1310600 | 37926.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.