Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EXZ48_06030 | Not Available | + | 1281797 - 1282480 | 25740.1 |
| hamp domain-containing protein | EXZ48_06035 | Not Available | + | 1282485 - 1283909 | 51989.6 |
| bifunctional | EXZ48_06040 | Not Available | + | 1283959 - 1286910 | 108287.0 |
| pas domain s-box protein | EXZ48_06045 | Not Available | - | 1286930 - 1289278 | 86195.1 |
| aminopeptidase n | EXZ48_06050 | Not Available | - | 1289492 - 1292140 | 97398.8 |
| dmt family transporter | EXZ48_06055 | Not Available | + | 1292430 - 1293401 | 34969.0 |
| mfs transporter | EXZ48_06060 | Not Available | - | 1293468 - 1294748 | 45176.8 |
| uracil-dna glycosylase | EXZ48_06065 | Not Available | - | 1295717 - 1296589 | 31499.6 |
| hsp70 family protein | EXZ48_06070 | Not Available | - | 1296640 - 1297932 | 46773.5 |
| sdr family oxidoreductase | EXZ48_06075 | Not Available | - | 1298223 - 1299011 | 27243.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.