Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycgn family cysteine cluster protein | EXZ48_05880 | Not Available | + | 1255565 - 1256050 | 18125.1 |
| mmcq/yjbr family dna-binding protein | EXZ48_05885 | Not Available | - | 1256058 - 1256390 | 11982.6 |
| hypothetical protein | EXZ48_05890 | Not Available | + | 1256651 - 1257214 | 20267.9 |
| hamp domain-containing histidine kinase | EXZ48_05995 | Not Available | + | 1273707 - 1275125 | 51681.9 |
| hypothetical protein | EXZ48_06000 | Not Available | + | 1275331 - 1275762 | 14216.8 |
| c-type cytochrome biogenesis protein ccmi | EXZ48_06005 | Not Available | + | 1275951 - 1277090 | 40338.1 |
| cytochrome c maturation protein ccme | EXZ48_06010 | Not Available | + | 1277087 - 1277536 | 15811.2 |
| heme lyase ccmf/nrfe family subunit | EXZ48_06015 | Not Available | + | 1277533 - 1279518 | 71156.3 |
| cytochrome c-type biogenesis protein ccmh | EXZ48_06020 | Not Available | + | 1279515 - 1279973 | 16751.5 |
| do family serine endopeptidase | EXZ48_06025 | Not Available | + | 1280106 - 1281680 | 55047.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.