Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing histidine kinase | EXZ48_05830 | Not Available | + | 1243660 - 1245189 | 53621.2 |
| peptidoglycan-binding protein | EXZ48_05835 | Not Available | + | 1245161 - 1245886 | 26093.2 |
| methyl-accepting chemotaxis protein | EXZ48_05840 | Not Available | + | 1246009 - 1247460 | 50780.9 |
| duf1491 family protein | EXZ48_05845 | Not Available | + | 1247546 - 1247917 | 13674.1 |
| calcium-binding protein | EXZ48_05850 | Not Available | + | 1248111 - 1249763 | 53976.5 |
| duf2336 domain-containing protein | EXZ48_05855 | Not Available | - | 1249999 - 1250976 | 35196.5 |
| hypothetical protein | EXZ48_05860 | Not Available | + | 1251571 - 1251759 | 7002.65 |
| duf1254 domain-containing protein | EXZ48_05865 | Not Available | - | 1251892 - 1252443 | 19600.4 |
| duf1214 domain-containing protein | EXZ48_05870 | Not Available | - | 1252436 - 1253029 | 20573.7 |
| pbp1a family penicillin-binding protein | EXZ48_05875 | Not Available | - | 1253059 - 1255251 | 79787.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.