Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EXZ48_05730 | Not Available | - | 1228892 - 1229845 | 34318.4 |
| trar/dksa family transcriptional regulator | EXZ48_05735 | Not Available | + | 1230057 - 1230380 | 11595.8 |
| hemolysin iii family protein | EXZ48_05740 | Not Available | + | 1230516 - 1231175 | 23449.1 |
| hypothetical protein | EXZ48_05745 | Not Available | - | 1231191 - 1231691 | 18069.5 |
| n-acetyltransferase family protein | EXZ48_05750 | Not Available | + | 1231922 - 1232425 | 18761.6 |
| peptide-methionine (r)-s-oxide reductase | EXZ48_05755 | Not Available | - | 1232456 - 1232863 | 15287.8 |
| abrb/maze/spovt family dna-binding domain-containing protein | EXZ48_05760 | Not Available | + | 1233004 - 1233237 | 8247.94 |
| pin domain-containing protein | EXZ48_05765 | Not Available | + | 1233240 - 1233656 | 14984.0 |
| putative monovalent cation/h+ antiporter subunit a | EXZ48_05770 | Not Available | + | 1233783 - 1236107 | 82333.3 |
| na(+)/h(+) antiporter subunit b | EXZ48_05775 | Not Available | + | 1236104 - 1236520 | 14551.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.