Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix protein, copg family | EXZ48_05630 | Not Available | + | 1208880 - 1209137 | 9362.02 |
| type ii toxin-antitoxin system rele/pare family toxin | EXZ48_05635 | Not Available | + | 1209134 - 1209442 | 11536.0 |
| yafy family transcriptional regulator | EXZ48_05640 | Not Available | - | 1209446 - 1210147 | 26284.7 |
| lyse family translocator | EXZ48_05645 | Not Available | + | 1210269 - 1210904 | 22463.2 |
| cytochrome c556 | EXZ48_05650 | Not Available | + | 1211036 - 1211482 | 14938.0 |
| c-type cytochrome | EXZ48_05655 | Not Available | + | 1211643 - 1212551 | 31526.6 |
| glutamine amidotransferase | EXZ48_05660 | Not Available | - | 1212746 - 1213330 | 20005.8 |
| gnat family n-acetyltransferase | EXZ48_05665 | Not Available | - | 1213356 - 1213856 | 18225.2 |
| hypothetical protein | EXZ48_05670 | Not Available | - | 1214080 - 1214529 | 15832.5 |
| abc transporter atp-binding protein | EXZ48_05675 | Not Available | - | 1214599 - 1216275 | 60534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.