Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2384 domain-containing protein | EXZ48_05580 | Not Available | + | 1199405 - 1199782 | 13379.4 |
| res domain-containing protein | EXZ48_05585 | Not Available | + | 1199742 - 1200500 | 27295.4 |
| abc-f family atp-binding cassette domain-containing protein | EXZ48_05590 | Not Available | - | 1200489 - 1202015 | 55440.4 |
| duf853 domain-containing protein | EXZ48_05595 | Not Available | - | 1202479 - 1204044 | 56671.8 |
| hypothetical protein | EXZ48_05600 | Not Available | + | 1204292 - 1204684 | 12886.7 |
| clbs/dfsb family four-helix bundle protein | EXZ48_05605 | Not Available | - | 1204727 - 1205239 | 19288.2 |
| mfs transporter | EXZ48_05610 | Not Available | - | 1205328 - 1206482 | 39453.9 |
| class c beta-lactamase-related serine hydrolase | EXZ48_05615 | Not Available | - | 1206555 - 1207535 | 35757.8 |
| hypothetical protein | EXZ48_05620 | Not Available | - | 1207557 - 1207949 | 13976.5 |
| superoxide dismutase | EXZ48_05625 | Not Available | + | 1208158 - 1208760 | 22529.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.