Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EXZ48_05530 | Not Available | - | 1188027 - 1188917 | 32227.7 |
| duf2000 family protein | EXZ48_05535 | Not Available | + | 1188916 - 1189323 | 14537.4 |
| ribonuclease d | EXZ48_05540 | Not Available | - | 1189427 - 1190572 | 42504.4 |
| multicopper oxidase family protein | EXZ48_05545 | Not Available | - | 1190669 - 1192054 | 50046.1 |
| mfs transporter | EXZ48_05550 | Not Available | - | 1192139 - 1193374 | 43570.9 |
| response regulator | EXZ48_05555 | Not Available | - | 1193472 - 1193849 | 14555.4 |
| pas domain s-box protein | EXZ48_05560 | Not Available | - | 1193852 - 1195783 | 70451.0 |
| marr family transcriptional regulator | EXZ48_05565 | Not Available | - | 1195872 - 1196363 | 17842.3 |
| organic hydroperoxide resistance protein | EXZ48_05570 | Not Available | + | 1196478 - 1196900 | 14207.0 |
| methyl-accepting chemotaxis protein | EXZ48_05575 | Not Available | - | 1196974 - 1198848 | 66599.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.