Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | EXZ48_05480 | Not Available | - | 1175856 - 1176815 | 34914.3 |
| twin-arginine translocation signal domain-containing protein | EXZ48_05485 | Not Available | + | 1177086 - 1177862 | 28728.2 |
| phosphoribosylglycinamide formyltransferase | EXZ48_05490 | Not Available | - | 1178028 - 1178693 | 23208.1 |
| phosphoribosylformylglycinamidine cyclo-ligase | EXZ48_05495 | Not Available | - | 1178690 - 1179763 | 36795.4 |
| ai-2e family transporter | EXZ48_05500 | Not Available | + | 1180142 - 1181260 | 40318.6 |
| hypothetical protein | EXZ48_05505 | Not Available | + | 1181339 - 1182034 | 25188.3 |
| rna degradosome polyphosphate kinase | EXZ48_05510 | Not Available | + | 1182175 - 1184391 | 82856.7 |
| ppx/gppa family phosphatase | EXZ48_05515 | Not Available | + | 1184403 - 1185923 | 54757.3 |
| duf922 domain-containing protein | EXZ48_05520 | Not Available | + | 1185932 - 1186516 | 21638.1 |
| glycerophosphodiester phosphodiesterase | EXZ48_05525 | Not Available | - | 1186561 - 1187919 | 48912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.