Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_05430 | Not Available | + | 1164936 - 1165115 | 6559.01 |
| pepsy domain-containing protein | EXZ48_05435 | Not Available | + | 1165106 - 1166494 | 50249.0 |
| copper chaperone pcu(a)c | EXZ48_05440 | Not Available | + | 1166521 - 1167018 | 17442.1 |
| hypothetical protein | EXZ48_05445 | Not Available | + | 1167018 - 1167272 | 9042.62 |
| tigr03808 family tat-translocated repetitive protein | EXZ48_05450 | Not Available | - | 1167383 - 1168750 | 47320.8 |
| eal domain-containing protein | EXZ48_05455 | Not Available | + | 1168985 - 1171285 | 84567.7 |
| ggdef domain-containing protein | EXZ48_05460 | Not Available | - | 1171391 - 1172488 | 41711.3 |
| marr family transcriptional regulator | EXZ48_05465 | Not Available | + | 1172647 - 1173093 | 16590.4 |
| ligase-associated dna damage response exonuclease | EXZ48_05470 | Not Available | + | 1173183 - 1174193 | 36644.7 |
| cisplatin damage response atp-dependent dna ligase | EXZ48_05475 | Not Available | + | 1174234 - 1175859 | 60485.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.