Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EXZ48_05380 | Not Available | + | 1157456 - 1158322 | 30969.1 |
| duf3750 domain-containing protein | EXZ48_05385 | Not Available | - | 1158346 - 1159083 | 26525.0 |
| asparaginase | EXZ48_05390 | Not Available | + | 1159167 - 1160174 | 34938.9 |
| deor/glpr transcriptional regulator | EXZ48_05395 | Not Available | - | 1160175 - 1160930 | 26795.6 |
| duf4406 domain-containing protein | EXZ48_05400 | Not Available | + | 1161030 - 1161395 | 13122.9 |
| glyoxalase | EXZ48_05405 | Not Available | + | 1161502 - 1161897 | 14524.3 |
| hypothetical protein | EXZ48_05410 | Not Available | - | 1162139 - 1162486 | 12819.9 |
| hypothetical protein | EXZ48_05415 | Not Available | - | 1162542 - 1162736 | 7067.49 |
| lysr family transcriptional regulator | EXZ48_05420 | Not Available | + | 1162840 - 1163781 | 33575.4 |
| glutathione s-transferase family protein | EXZ48_05425 | Not Available | - | 1163741 - 1164400 | 24066.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.