Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysd | EXZ48_05280 | Not Available | - | 1138607 - 1139560 | 36458.4 |
| phosphoadenylyl-sulfate reductase | EXZ48_05285 | Not Available | - | 1139608 - 1140357 | 27242.2 |
| hypothetical protein | EXZ48_05290 | Not Available | + | 1140984 - 1141529 | 18522.0 |
| hypothetical protein | EXZ48_05295 | Not Available | + | 1141695 - 1142057 | 12993.4 |
| duf2214 domain-containing protein | EXZ48_05300 | Not Available | + | 1142068 - 1142541 | 16146.3 |
| hypothetical protein | EXZ48_05305 | Not Available | - | 1142534 - 1142812 | 10142.1 |
| choline dehydrogenase | EXZ48_05310 | Not Available | - | 1142876 - 1144528 | 60645.0 |
| betaine-aldehyde dehydrogenase | EXZ48_05315 | Not Available | - | 1144695 - 1146158 | 51881.0 |
| choline-sulfatase | EXZ48_05320 | Not Available | - | 1146160 - 1147689 | 57903.4 |
| transcriptional regulator beti | EXZ48_05325 | Not Available | - | 1147728 - 1148381 | 22928.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.