Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_05225 | Not Available | - | 1128496 - 1129131 | 23899.4 |
| hypothetical protein | EXZ48_05230 | Not Available | + | 1129316 - 1129891 | 20812.4 |
| hypothetical protein | EXZ48_05235 | Not Available | + | 1129933 - 1130238 | 11157.8 |
| integrase | EXZ48_05245 | Not Available | + | 1130438 - 1131547 | 41439.8 |
| Trna-pro | Not Available | Not Available | + | 1131632 - 1131708 | Not Available |
| mgtc/sapb family protein | EXZ48_05255 | Not Available | + | 1131867 - 1132370 | 17614.7 |
| type i secretion system permease/atpase | EXZ48_05260 | Not Available | + | 1132585 - 1134315 | 62402.3 |
| hlyd family type i secretion periplasmic adaptor subunit | EXZ48_05265 | Not Available | + | 1134329 - 1135645 | 47714.5 |
| bile acid:sodium symporter family protein | EXZ48_05270 | Not Available | + | 1135754 - 1136716 | 33167.9 |
| sulfate adenylyltransferase subunit cysn | EXZ48_05275 | Not Available | - | 1137112 - 1138605 | 54149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.