Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3307 domain-containing protein | EXZ48_05170 | Not Available | - | 1119569 - 1119976 | 14840.5 |
| age family epimerase/isomerase | EXZ48_05175 | Not Available | - | 1120111 - 1121352 | 46797.9 |
| glycosyltransferase family 1 protein | EXZ48_05180 | Not Available | + | 1122379 - 1123494 | 39995.6 |
| phenylacetate--coa ligase family protein | EXZ48_05185 | Not Available | + | 1123491 - 1124909 | 52691.1 |
| alpha/beta fold hydrolase | EXZ48_05190 | Not Available | + | 1125145 - 1126830 | 60098.6 |
| hypothetical protein | EXZ48_05195 | Not Available | - | 1126853 - 1127136 | 10544.7 |
| transcriptional regulator | EXZ48_05200 | Not Available | + | 1127223 - 1127462 | 8307.21 |
| hypothetical protein | EXZ48_05210 | Not Available | - | 1127883 - 1128068 | 6640.59 |
| hypothetical protein | EXZ48_05215 | Not Available | + | 1128062 - 1128253 | 7059.77 |
| duf2934 domain-containing protein | EXZ48_05220 | Not Available | + | 1128256 - 1128444 | 7198.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.