Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphate aldolase class ii | EXZ48_05120 | Not Available | + | 1105993 - 1107036 | 37572.9 |
| alpha-hydroxy-acid oxidizing protein | EXZ48_05125 | Not Available | + | 1107265 - 1108413 | 42591.3 |
| histone deacetylase family protein | EXZ48_05130 | Not Available | - | 1108421 - 1109455 | 37994.6 |
| glutamine synthetase | EXZ48_05135 | Not Available | - | 1109458 - 1110846 | 50525.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EXZ48_05140 | Not Available | - | 1110843 - 1112216 | 48455.4 |
| helix-turn-helix domain-containing protein | EXZ48_05145 | Not Available | - | 1112356 - 1113405 | 38350.3 |
| hypothetical protein | EXZ48_05150 | Not Available | + | 1113681 - 1114595 | 33316.2 |
| alginate lyase family protein | EXZ48_05155 | Not Available | - | 1114696 - 1116645 | 70088.3 |
| glycosyltransferase wbub | EXZ48_05160 | Not Available | - | 1116763 - 1118013 | 46503.1 |
| nucleotide sugar dehydrogenase | EXZ48_05165 | Not Available | - | 1118025 - 1119293 | 45975.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.