Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter subunit e | EXZ48_05070 | Not Available | + | 1095468 - 1095944 | 17419.9 |
| k+/h+ antiporter subunit f | EXZ48_05075 | Not Available | + | 1095941 - 1096222 | 10356.2 |
| cation:proton antiporter | EXZ48_05080 | Not Available | + | 1096219 - 1096614 | 13973.1 |
| fadr family transcriptional regulator | EXZ48_05085 | Not Available | + | 1096795 - 1097517 | 26963.6 |
| hypothetical protein | EXZ48_05090 | Not Available | + | 1097514 - 1098686 | 42049.7 |
| sugar abc transporter substrate-binding protein | EXZ48_05095 | Not Available | + | 1098727 - 1099986 | 46188.0 |
| sugar abc transporter permease | EXZ48_05100 | Not Available | + | 1100073 - 1100996 | 33816.2 |
| carbohydrate abc transporter permease | EXZ48_05105 | Not Available | + | 1101001 - 1101831 | 30241.1 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | EXZ48_05110 | Not Available | + | 1101843 - 1102910 | 38819.2 |
| dna translocase ftsk | EXZ48_05115 | Not Available | + | 1103018 - 1105747 | 98581.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.