Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter, permease protein phne | EXZ48_05020 | Not Available | + | 1083212 - 1084714 | 54769.8 |
| duf1045 domain-containing protein | EXZ48_05025 | Not Available | + | 1084819 - 1085526 | 25986.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | EXZ48_05030 | Not Available | + | 1085528 - 1086667 | 41545.4 |
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | EXZ48_05035 | Not Available | + | 1086670 - 1087269 | 20695.7 |
| deoxyribodipyrimidine photo-lyase | EXZ48_05040 | Not Available | - | 1087335 - 1088774 | 53636.9 |
| duf454 domain-containing protein | EXZ48_05045 | Not Available | - | 1088782 - 1089147 | 13340.9 |
| duf2934 domain-containing protein | EXZ48_05050 | Not Available | - | 1089358 - 1089684 | 11884.0 |
| monovalent cation/h+ antiporter subunit a | EXZ48_05055 | Not Available | + | 1090576 - 1093494 | 105854.0 |
| na+/h+ antiporter subunit c | EXZ48_05060 | Not Available | + | 1093494 - 1093832 | 11681.7 |
| monovalent cation/h+ antiporter subunit d | EXZ48_05065 | Not Available | + | 1093829 - 1095466 | 56728.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.