Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phng | EXZ48_04970 | Not Available | + | 1074863 - 1075330 | 15999.0 |
| phosphonate c-p lyase system protein phnh | EXZ48_04975 | Not Available | + | 1075330 - 1075938 | 21662.2 |
| carbon-phosphorus lyase complex subunit phni | EXZ48_04980 | Not Available | + | 1075943 - 1077043 | 40448.2 |
| carbon-phosphorus lyase | EXZ48_04985 | Not Available | + | 1077040 - 1077924 | 33049.5 |
| phosphonate c-p lyase system protein phnk | EXZ48_04990 | Not Available | + | 1077921 - 1078697 | 28627.9 |
| phosphonate c-p lyase system protein phnl | EXZ48_04995 | Not Available | + | 1078700 - 1079407 | 25119.7 |
| acetyltransferase | EXZ48_05000 | Not Available | + | 1079404 - 1080018 | 22840.9 |
| phosphonate abc transporter atp-binding protein | EXZ48_05005 | Not Available | + | 1080184 - 1081032 | 30766.3 |
| phosphonate abc transporter substrate-binding protein | EXZ48_05010 | Not Available | + | 1081115 - 1082020 | 32089.6 |
| phosphonate abc transporter, permease protein phne | EXZ48_05015 | Not Available | + | 1082240 - 1083202 | 35888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.