Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_04920 | Not Available | - | 1065386 - 1066288 | 32998.9 |
| abc transporter atp-binding protein | EXZ48_04925 | Not Available | - | 1066290 - 1067372 | 39258.2 |
| spermidine/putrescine abc transporter substrate-binding protein | EXZ48_04930 | Not Available | + | 1067630 - 1068607 | 36261.4 |
| murr/rpir family transcriptional regulator | EXZ48_04935 | Not Available | + | 1068664 - 1069518 | 31601.1 |
| abc transporter substrate-binding protein | EXZ48_04940 | Not Available | + | 1069934 - 1070977 | 37021.2 |
| iron abc transporter permease | EXZ48_04945 | Not Available | + | 1070974 - 1072002 | 34759.9 |
| abc transporter atp-binding protein | EXZ48_04950 | Not Available | + | 1071999 - 1072802 | 28902.2 |
| pseudoazurin | EXZ48_04955 | Not Available | + | 1072799 - 1073248 | 16199.7 |
| sam-dependent methyltransferase | EXZ48_04960 | Not Available | + | 1073248 - 1074024 | 28960.0 |
| phosphonate metabolism transcriptional regulator phnf | EXZ48_04965 | Not Available | - | 1074002 - 1074757 | 27345.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.