Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase c45 | EXZ48_04870 | Not Available | - | 1055250 - 1056293 | 38043.4 |
| glutamine abc transporter atp-binding protein glnq | EXZ48_04875 | Not Available | - | 1056283 - 1057011 | 26652.5 |
| glutamine abc transporter permease glnp | EXZ48_04880 | Not Available | - | 1057008 - 1057664 | 23602.0 |
| glutamine abc transporter substrate-binding protein glnh | EXZ48_04885 | Not Available | - | 1057779 - 1058519 | 27093.4 |
| aspartate aminotransferase family protein | EXZ48_04890 | Not Available | - | 1058541 - 1059878 | 47707.7 |
| murr/rpir family transcriptional regulator | EXZ48_04895 | Not Available | - | 1059875 - 1060759 | 30830.4 |
| 3-keto-5-aminohexanoate cleavage protein | EXZ48_04900 | Not Available | + | 1060851 - 1061690 | 29748.9 |
| hypothetical protein | EXZ48_04905 | Not Available | + | 1061709 - 1063355 | 58491.0 |
| s58 family peptidase | EXZ48_04910 | Not Available | - | 1063406 - 1064542 | 40544.4 |
| abc transporter permease | EXZ48_04915 | Not Available | - | 1064544 - 1065374 | 30670.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.