Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | EXZ48_04765 | Not Available | + | 1035549 - 1036748 | 44139.8 |
| gntr family transcriptional regulator | EXZ48_04770 | Not Available | + | 1036821 - 1037513 | 25887.2 |
| sugar abc transporter substrate-binding protein | EXZ48_04775 | Not Available | + | 1037560 - 1038534 | 34425.1 |
| abc transporter permease | EXZ48_04780 | Not Available | + | 1038603 - 1039586 | 34576.9 |
| sugar abc transporter atp-binding protein | EXZ48_04785 | Not Available | + | 1039583 - 1040314 | 26630.4 |
| sdr family oxidoreductase | EXZ48_04790 | Not Available | + | 1040322 - 1041077 | 26489.6 |
| aldose 1-epimerase | EXZ48_04795 | Not Available | + | 1041074 - 1041970 | 32867.6 |
| coa transferase | EXZ48_04800 | Not Available | + | 1042168 - 1043322 | 41670.1 |
| extracellular solute-binding protein | EXZ48_04805 | Not Available | + | 1043322 - 1044467 | 41018.7 |
| iclr family transcriptional regulator | EXZ48_04810 | Not Available | - | 1044513 - 1045304 | 28802.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.