Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein | EXZ48_04710 | Not Available | + | 1022797 - 1023699 | 32290.4 |
| extracellular solute-binding protein | EXZ48_04715 | Not Available | + | 1023606 - 1024061 | 15600.5 |
| sugar abc transporter permease | EXZ48_04720 | Not Available | + | 1024156 - 1025040 | 32939.6 |
| carbohydrate abc transporter permease | EXZ48_04725 | Not Available | + | 1025042 - 1025887 | 30584.1 |
| duf5107 domain-containing protein | EXZ48_04730 | Not Available | + | 1025884 - 1027920 | 74605.2 |
| abc transporter atp-binding protein | EXZ48_04735 | Not Available | + | 1027920 - 1029056 | 40433.3 |
| transcriptional regulator | EXZ48_04740 | Not Available | + | 1029053 - 1029928 | 31518.9 |
| tagatose-6-phosphate kinase | EXZ48_04750 | Not Available | + | 1031985 - 1033277 | 46519.0 |
| n-acetylglucosamine-6-phosphate deacetylase | EXZ48_04755 | Not Available | + | 1033274 - 1034419 | 39938.4 |
| fadr family transcriptional regulator | EXZ48_04760 | Not Available | + | 1034884 - 1035546 | 24231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.