Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_04660 | Not Available | + | 1009726 - 1010508 | 27531.7 |
| plp-dependent aminotransferase family protein | EXZ48_04665 | Not Available | - | 1010505 - 1011905 | 50400.6 |
| dmt family transporter | EXZ48_04670 | Not Available | + | 1012102 - 1012965 | 29755.4 |
| glxa family transcriptional regulator | EXZ48_04675 | Not Available | + | 1013126 - 1014115 | 36098.4 |
| hypothetical protein | EXZ48_04680 | Not Available | + | 1014204 - 1014530 | 11534.6 |
| hypothetical protein | EXZ48_04685 | Not Available | - | 1014631 - 1014936 | 10622.6 |
| damage-inducible protein | EXZ48_04690 | Not Available | + | 1015111 - 1015872 | 26687.1 |
| dna polymerase y family protein | EXZ48_04695 | Not Available | + | 1015784 - 1017307 | 54954.7 |
| dna polymerase iii subunit alpha | EXZ48_04700 | Not Available | + | 1017304 - 1020498 | 120153.0 |
| coce/nond family hydrolase | EXZ48_04705 | Not Available | - | 1020555 - 1022555 | 73674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.