Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein cas4 | EXZ48_04610 | Not Available | + | 995288 - 995953 | 24269.3 |
| type i-c crispr-associated endonuclease cas1 | EXZ48_04615 | Not Available | + | 995950 - 996984 | 38613.8 |
| crispr-associated endonuclease cas2 | EXZ48_04620 | Not Available | + | 996992 - 997282 | 10763.0 |
| aspartate aminotransferase family protein | EXZ48_04625 | Not Available | - | 1001946 - 1003262 | 47247.8 |
| phosphotransferase | EXZ48_04630 | Not Available | - | 1003265 - 1004314 | 37823.2 |
| gntr family transcriptional regulator | EXZ48_04635 | Not Available | + | 1004501 - 1005181 | 24938.2 |
| sdr family oxidoreductase | EXZ48_04640 | Not Available | + | 1005254 - 1005994 | 26329.6 |
| abc transporter substrate-binding protein | EXZ48_04645 | Not Available | + | 1006202 - 1007254 | 38071.9 |
| abc transporter atp-binding protein | EXZ48_04650 | Not Available | + | 1007474 - 1008547 | 39124.2 |
| abc transporter permease | EXZ48_04655 | Not Available | + | 1008544 - 1009722 | 42365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.