Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | EXZ48_04560 | Not Available | + | 981814 - 983259 | 50731.4 |
| biotin carboxylase | EXZ48_04565 | Not Available | + | 983378 - 984832 | 55069.2 |
| hypothetical protein | EXZ48_04570 | Not Available | + | 984839 - 985855 | 37798.7 |
| d-amino acid dehydrogenase | EXZ48_04575 | Not Available | + | 985979 - 987226 | 45113.9 |
| alanine racemase | EXZ48_04580 | Not Available | + | 987284 - 989077 | 64049.6 |
| rida family protein | EXZ48_04585 | Not Available | + | 989100 - 989438 | 12049.6 |
| crispr-associated helicase cas3' | EXZ48_04590 | Not Available | + | 989607 - 991871 | 83538.5 |
| type i-c crispr-associated protein cas5 | EXZ48_04595 | Not Available | + | 991900 - 992568 | 24838.0 |
| type i-c crispr-associated protein cas8c/csd1 | EXZ48_04600 | Not Available | + | 992565 - 994337 | 64345.2 |
| type i-c crispr-associated protein cas7/csd2 | EXZ48_04605 | Not Available | + | 994334 - 995284 | 35203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.