Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | EXZ48_04510 | Not Available | + | 971636 - 972970 | 48701.8 |
| hypothetical protein | EXZ48_04515 | Not Available | + | 972967 - 973404 | 15239.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EXZ48_04520 | Not Available | + | 973401 - 974054 | 23873.3 |
| phosphatidate cytidylyltransferase | EXZ48_04525 | Not Available | + | 974054 - 974983 | 33852.9 |
| carbon-nitrogen hydrolase family protein | EXZ48_04530 | Not Available | - | 975011 - 975775 | 27383.8 |
| lrp/asnc family transcriptional regulator | EXZ48_04535 | Not Available | - | 975943 - 976485 | 19956.2 |
| amino acid permease | EXZ48_04540 | Not Available | + | 976765 - 978258 | 52100.3 |
| universal stress protein | EXZ48_04545 | Not Available | + | 978255 - 979127 | 30190.8 |
| agmatinase | EXZ48_04550 | Not Available | + | 979225 - 980178 | 34554.6 |
| 5-guanidino-2-oxopentanoate decarboxylase | EXZ48_04555 | Not Available | + | 980181 - 981803 | 56365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.