Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-ta family plp-dependent enzyme | EXZ48_04460 | Not Available | + | 961307 - 962395 | 38378.9 |
| rida family protein | EXZ48_04465 | Not Available | + | 962469 - 962861 | 14035.6 |
| flavin reductase | EXZ48_04470 | Not Available | + | 963061 - 963600 | 18770.3 |
| llm class flavin-dependent oxidoreductase | EXZ48_04475 | Not Available | + | 963724 - 965076 | 49500.1 |
| abc transporter permease | EXZ48_04480 | Not Available | + | 965086 - 965937 | 30369.1 |
| abc transporter substrate-binding protein | EXZ48_04485 | Not Available | + | 965973 - 966947 | 34527.9 |
| abc transporter atp-binding protein | EXZ48_04490 | Not Available | + | 966956 - 967726 | 28146.2 |
| replication-associated recombination protein a | EXZ48_04495 | Not Available | + | 967856 - 969172 | 47489.8 |
| cdp-alcohol phosphatidyltransferase family protein | EXZ48_04500 | Not Available | - | 969176 - 969772 | 20884.1 |
| alpha/beta fold hydrolase | EXZ48_04505 | Not Available | + | 969892 - 971628 | 63994.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.