Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | EXZ48_04410 | Not Available | + | 950404 - 952605 | 79143.0 |
| duf3327 domain-containing protein | EXZ48_04415 | Not Available | + | 952599 - 954212 | 57013.2 |
| duf2218 domain-containing protein | EXZ48_04420 | Not Available | + | 954312 - 954611 | 11162.0 |
| siderophore abc transporter substrate-binding protein | EXZ48_04425 | Not Available | + | 954645 - 955547 | 31020.4 |
| abc transporter permease | EXZ48_04430 | Not Available | + | 955544 - 956521 | 33589.4 |
| iron abc transporter permease | EXZ48_04435 | Not Available | + | 956514 - 957455 | 32462.3 |
| atp-binding cassette domain-containing protein | EXZ48_04440 | Not Available | + | 957452 - 958210 | 27330.4 |
| fad-binding oxidoreductase | EXZ48_04445 | Not Available | + | 958277 - 959557 | 46249.4 |
| sdr family oxidoreductase | EXZ48_04450 | Not Available | + | 959665 - 960438 | 26504.8 |
| sdr family oxidoreductase | EXZ48_04455 | Not Available | + | 960449 - 961198 | 25887.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.